blastp task: [no title]

Status
finished finished
Modified 2014-04-02T09:08:03Z
CPU time (s) 0.7
Size (bytes) 22241
Command blastp -num_descriptions 500 -outfmt 0 -db 'gsASS001Lm.aug.trna.KL.rRNA2.faa Kluyveromyces_aestuarii_ATCC_18862.AEAS00000000_1.aug.faa Kluyveromyces_wickerhamii_UCD_54_210.AEAV00000000_1.aug.faa Kluyveromyces_lactis.faa Kluyveromyces_lactis_Y-1140.faa YEAST.fasta' -num_alignments 250 -seg no -evalue 10.0 -task blastp
Error
Warning: (1431.1) CFastaReader: Ignoring invalid residue 5 at line 3, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 3, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 4, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 0 at line 4, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 4, position 2
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 5, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 5 at line 5, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 5, position 2
Warning: (1431.1) CFastaReader: Ignoring invalid residue 2 at line 6, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 0 at line 6, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 6, position 2
Warning: (1431.1) CFastaReader: Ignoring invalid residue 2 at line 7, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 5 at line 7, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 7, position 2
Warning: (1431.1) CFastaReader: Ignoring invalid residue 3 at line 8, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 0 at line 8, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 8, position 2
Warning: (1431.1) CFastaReader: Ignoring invalid residue 3 at line 9, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 5 at line 9, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 9, position 2
Warning: (1431.1) CFastaReader: Ignoring invalid residue 4 at line 10, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 0 at line 10, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 10, position 2
Warning: (1431.1) CFastaReader: Ignoring invalid residue 4 at line 11, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 5 at line 11, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 11, position 2
Warning: (1431.1) CFastaReader: Ignoring invalid residue 5 at line 12, position 0
Warning: (1431.1) CFastaReader: Ignoring invalid residue 0 at line 12, position 1
Warning: (1431.1) CFastaReader: Ignoring invalid residue 1 at line 12, position 2
Output
BLASTP 2.2.25+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Kluyveromyces dobzhanskii proteins (Sep 2011); Kluyveromyces
aestuari
i ATCC 18862 AEAS00000000_1 proteins; Kluyveromyces wickerhamii UCD
54 210 AEAV00000000_1 proteins; Kluyveromyces lactis; Kluyveromyces
lactis NRRL Y-1140; Saccharomyces cerevisiae Swiss-Prot
           31,396 sequences; 15,124,352 total letters



Query= query

Length=525
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  sp|P40353|ATF1_YEAST Alcohol O-acetyltransferase 1 OS=Saccharom...  1098    0.0   
  sp|P53296|ATF2_YEAST Alcohol O-acetyltransferase 2 OS=Saccharom...   369    3e-102
  KLWIg4013 KLWIg4013 undefined product 8136900:8138459 forward M...   315    8e-86 
  gi|50311475|ref|XP_455762.1| hypothetical protein [Kluyveromyce...   282    4e-76 
  gi|50311475|ref|XP_455762.1| hypothetical protein [Kluyveromyce...   282    4e-76 
  KLDOg4322                                                            279    4e-75 
  KLAEg691 KLAEg691 undefined product 1518794:1520374 forward MW:...  30.0    4.4   
  sp|P32479|HIR1_YEAST Protein HIR1 OS=Saccharomyces cerevisiae (...  29.6    6.3   
  KLDOg3269                                                           29.3    8.7   


> sp|P40353|ATF1_YEAST Alcohol O-acetyltransferase 1 OS=Saccharomyces 
cerevisiae (strain ATCC 204508 / S288c) GN=ATF1 PE=1 
SV=2
Length=525

 Score = 1098 bits (2841),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 525/525 (100%), Positives = 525/525 (100%), Gaps = 0/525 (0%)

Query  1    MNEIDEKNQAPVQQECLKEMIQNGHARRMGSVEDLYVALNRQNLYRNFCTYGELSDYCTR  60
            MNEIDEKNQAPVQQECLKEMIQNGHARRMGSVEDLYVALNRQNLYRNFCTYGELSDYCTR
Sbjct  1    MNEIDEKNQAPVQQECLKEMIQNGHARRMGSVEDLYVALNRQNLYRNFCTYGELSDYCTR  60

Query  61   DQLTLALREICLKNPTLLHIVLPTRWPNHENYYRSSEYYSRPHPVHDYISVLQELKLSGV  120
            DQLTLALREICLKNPTLLHIVLPTRWPNHENYYRSSEYYSRPHPVHDYISVLQELKLSGV
Sbjct  61   DQLTLALREICLKNPTLLHIVLPTRWPNHENYYRSSEYYSRPHPVHDYISVLQELKLSGV  120

Query  121  VLNEQPEYSAVMKQILEEFKNSKGSYTAKIFKLTTTLTIPYFGPTGPSWRLICLPEEHTE  180
            VLNEQPEYSAVMKQILEEFKNSKGSYTAKIFKLTTTLTIPYFGPTGPSWRLICLPEEHTE
Sbjct  121  VLNEQPEYSAVMKQILEEFKNSKGSYTAKIFKLTTTLTIPYFGPTGPSWRLICLPEEHTE  180

Query  181  KWKKFIFVSNHCMSDGRSSIHFFHDLRDELNNIKTPPKKLDYIFKYEEDYQLLRKLPEPI  240
            KWKKFIFVSNHCMSDGRSSIHFFHDLRDELNNIKTPPKKLDYIFKYEEDYQLLRKLPEPI
Sbjct  181  KWKKFIFVSNHCMSDGRSSIHFFHDLRDELNNIKTPPKKLDYIFKYEEDYQLLRKLPEPI  240

Query  241  EKVIDFRPPYLFIPKSLLSGFIYNHLRFSSKGVCMRMDDVEKTDDVVTEIINISPTEFQA  300
            EKVIDFRPPYLFIPKSLLSGFIYNHLRFSSKGVCMRMDDVEKTDDVVTEIINISPTEFQA
Sbjct  241  EKVIDFRPPYLFIPKSLLSGFIYNHLRFSSKGVCMRMDDVEKTDDVVTEIINISPTEFQA  300

Query  301  IKANIKSNIQGKCTITPFLHVCWFVSLHKWGKFFKPLNFEWLTDIFIPADCRSQLPDDDE  360
            IKANIKSNIQGKCTITPFLHVCWFVSLHKWGKFFKPLNFEWLTDIFIPADCRSQLPDDDE
Sbjct  301  IKANIKSNIQGKCTITPFLHVCWFVSLHKWGKFFKPLNFEWLTDIFIPADCRSQLPDDDE  360

Query  361  MRQMYRYGANVGFIDFTPWISEFDMNDNKENFWPLIEHYHEVISEALRNKKHLHGLGFNI  420
            MRQMYRYGANVGFIDFTPWISEFDMNDNKENFWPLIEHYHEVISEALRNKKHLHGLGFNI
Sbjct  361  MRQMYRYGANVGFIDFTPWISEFDMNDNKENFWPLIEHYHEVISEALRNKKHLHGLGFNI  420

Query  421  QGFVQKYVNIDKVMCDRAIGKRRGGTLLSNVGLFNQLEEPDAKYSICDLAFGQFQGSWHQ  480
            QGFVQKYVNIDKVMCDRAIGKRRGGTLLSNVGLFNQLEEPDAKYSICDLAFGQFQGSWHQ
Sbjct  421  QGFVQKYVNIDKVMCDRAIGKRRGGTLLSNVGLFNQLEEPDAKYSICDLAFGQFQGSWHQ  480

Query  481  AFSLGVCSTNVKGMNIVVASTKNVVGSQESLEELCSIYKALLLGP  525
            AFSLGVCSTNVKGMNIVVASTKNVVGSQESLEELCSIYKALLLGP
Sbjct  481  AFSLGVCSTNVKGMNIVVASTKNVVGSQESLEELCSIYKALLLGP  525


> sp|P53296|ATF2_YEAST Alcohol O-acetyltransferase 2 OS=Saccharomyces 
cerevisiae (strain ATCC 204508 / S288c) GN=ATF2 PE=1 
SV=1
Length=535

 Score =  369 bits (947),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 192/517 (38%), Positives = 291/517 (57%), Gaps = 20/517 (3%)

Query  18   KEMIQNGHARRMGSVEDLYVALNRQNLYRNFCTYGELSDYCTRDQLTLALREICLKNPTL  77
            +E+I  GHARRMG +E+ +  L+RQ +Y NF  Y EL+    + QL L L+ +  K  TL
Sbjct  13   QELIDRGHARRMGHLENYFAVLSRQKMYSNFTVYAELNKGVNKRQLMLVLKVLLQKYSTL  72

Query  78   LHIVLPTRWPNHENYYRSSEYYSRPHPVHDYISVLQELKLSGVVLNEQPEYSAVMKQILE  137
             H ++P  +P+HE YY S EY S+P P HD+I V+  L+   +++N QPEY  VM++I E
Sbjct  73   AHTIIPKHYPHHEAYYSSEEYLSKPFPQHDFIKVISHLEFDDLIMNNQPEYREVMEKISE  132

Query  138  EFKNSKGSYTAKIFKLTTTLTIPYFGPTGPSWRLICLPEEHT---EKWKKFIFVSNHCMS  194
            +FK      T ++ +L + + IP   P  P+WRLICLP + T   E WK F++V+NHC S
Sbjct  133  QFKKDDFKVTNRLIELISPVIIPLGNPKRPNWRLICLPGKDTDGFETWKNFVYVTNHCGS  192

Query  195  DGRSSIHFFHDLRDELNNIKTPPKKLDY---------IFKYEEDYQLLRKLPEPIEKVID  245
            DG S  +FF DL   L   K   K  DY         I  Y+ DY  + KLP+PI   ID
Sbjct  193  DGVSGSNFFKDL--ALLFCKIEEKGFDYDEEFIEDQVIIDYDRDYTEISKLPKPITDRID  250

Query  246  FRPPYLFIPKSLLSGFIYNHLRF---SSKGVCMRMDDVEKTDDVVTEIINISPTEFQAIK  302
            ++P    +PK  L+ FIY H  F   S   +  R       +     +++ S  + + I+
Sbjct  251  YKPALTSLPKFFLTTFIYEHCNFKTSSESTLTARYSPSSNANASYNYLLHFSTKQVEQIR  310

Query  303  ANIKSNIQGKCTITPFLHVCWFVSLHKWGKFFKPLNFEWLTDIFIPADCRSQLPDDDEMR  362
            A IK N+   CT+TPF+  C+ V+L++  K F     E+  D+ IP++ R  LP+D+E+R
Sbjct  311  AQIKKNVHDGCTLTPFIQACFLVALYRLDKLFTKSLLEYGFDVAIPSNARRFLPNDEELR  370

Query  363  QMYRYGANVGFIDFTPWISEFDMND-NKENFWPLIEHYHEVISEALRNKKHLHGLGFNIQ  421
              Y+YG+NVG   +   IS FD+ + + + FW L+E+Y++   E+  N  HL GLG    
Sbjct  371  DSYKYGSNVGGSHYAYLISSFDIPEGDNDKFWSLVEYYYDRFLESYDNGDHLIGLGVLQL  430

Query  422  GFVQKYVNIDKVMCDRAIGKRRGGTLLSNVGLFNQLEEPDAKYSICDLAFGQFQGSWHQA  481
             F+ +  NID ++ +  + ++RGG ++SN GL +Q  +    Y + DL F Q  G+   A
Sbjct  431  DFIVENKNIDSLLANSYLHQQRGGAIISNTGLVSQ--DTTKPYYVRDLIFSQSAGALRFA  488

Query  482  FSLGVCSTNVKGMNIVVASTKNVVGSQESLEELCSIY  518
            F L VCSTNV GMN+ ++  +  +  +   E  C ++
Sbjct  489  FGLNVCSTNVNGMNMDMSVVQGTLRDRGEWESFCKLF  525


> KLWIg4013 KLWIg4013 undefined product 8136900:8138459 forward 
MW:60413
Length=520

 Score =  315 bits (806),  Expect = 8e-86, Method: Compositional matrix adjust.
 Identities = 171/498 (35%), Positives = 270/498 (55%), Gaps = 13/498 (2%)

Query  15   ECLKEMIQNGHARRMGSVEDLYVALNRQNLYRNFCTYGELSDYCTRDQLTLALREICLKN  74
            E  K  ++ GHARR+GSVE  +V   RQ LY +F  YGEL    ++DQL+ ALR + LK 
Sbjct  10   EVSKVKLERGHARRVGSVEQYFVICQRQKLYPSFGMYGELKASVSKDQLSHALRGMVLKY  69

Query  75   PTLLHIVLPTRWPNHENYYRSSEYYSRPHPVHDYISVLQELKLSGVVLNEQPEYSAVMKQ  134
            P LL+ V+P  W N + YY+S EY+  P+   DY++VL  L +  V++N+QPE+ A + +
Sbjct  70   PILLNTVIPENWENRDEYYQSEEYFKIPNVSIDYMTVLDRLTIDDVIINDQPEHEAAVNK  129

Query  135  ILEEFKNSKGSYTAKIFKLTTTLTIPYFGPTGPSWRLICLP---EEHTEKWKKFIFVSNH  191
            IL  ++     +T     L   + + Y  P  P +RL  LP    + + KWK  I+V+NH
Sbjct  130  ILSIWEQDGYKFTGNTSVLLDDIVLDYCDPGKPQFRLFLLPCSKGDTSNKWKHIIYVTNH  189

Query  192  CMSDGRSSIHFFHDLRDELNNIKTPPKKLDYIFKYEEDYQLLRKLPEPIEKVIDFRPPYL  251
              SDG SS++   DL +EL  +    + +  IF Y++D+  L KLP+PIE+ ID++P   
Sbjct  190  IGSDGTSSVNMLEDLSNELGKLTEDVEPMRTIFDYDQDHTALAKLPDPIEQKIDYQP---  246

Query  252  FIPKSLLSGFIYNHLRFSSKGVCMRMDDVEKTDDVVTE----IINISPTEFQAIKANIKS  307
               K  L+  +++ L               + D+   E    ++ ++P     +K  +K 
Sbjct  247  --SKWTLAKLVFSILGREYVSKLWEHPRTTRIDNSPAEHWAHLLKVTPLNMAKMKTRVKE  304

Query  308  NIQGKCTITPFLHVCWFVSLHKWGKFFKPLNFEWLTDIFIPADCRSQLPDDDEMRQMYRY  367
             + G+ T+TPFL  CWFVS ++ G F      E+  ++ IP +CR  LP+D E+R  +RY
Sbjct  305  KLHGQATLTPFLQACWFVSCYQAGIFENRKWNEYFANMSIPMNCRQLLPEDKELRDRFRY  364

Query  368  GANVGFIDFTPWISEFDMNDNKENFWPLIEHYHEVISEALRNKKHLHGLGFNIQGFVQKY  427
            G+N+G  +F   IS F+++ N+++FW L  HY E   ++      L   G      V   
Sbjct  365  GSNIGGTNFNYPISSFNVS-NEKDFWDLTNHYQEWFVKSKEQNLALKTFGMFFMDSVASS  423

Query  428  VNIDKVMCDRAIGKRRGGTLLSNVGLFNQLEEPDAKYSICDLAFGQFQGSWHQAFSLGVC  487
             N+DK++ D ++ K R  TL SN+G F+Q  +    Y + DL F Q        FSL   
Sbjct  424  QNLDKLLVDHSLNKLRTFTLFSNIGYFSQSTQEKNPYQLQDLVFSQTANEMPFIFSLSCV  483

Query  488  STNVKGMNIVVASTKNVV  505
            ST++KGM+ ++  +K+ +
Sbjct  484  STDIKGMSFMLTCSKDSI  501


> gi|50311475|ref|XP_455762.1| hypothetical protein [Kluyveromyces 
lactis NRRL Y-1140]
Length=517

 Score =  282 bits (722),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 166/510 (33%), Positives = 263/510 (52%), Gaps = 9/510 (1%)

Query  16   CLK-EMIQNGHARRMGSVEDLYVALNRQNLYRNFCTYGELSDYCTRDQLTLALREICLKN  74
            CL  + ++ GHARR G VE++ +  +RQ LY NF  +GEL    +  QL  ALR + L+ 
Sbjct  5    CLSSKKLERGHARRAGYVEEVLLMEHRQKLYSNFVVHGELKSAASELQLAHALRALFLRY  64

Query  75   PTLLHIVLPTRWPNHENYYRSSEYYSRPHPVHDYISVLQELKLSGVVLNEQPEYSAVMKQ  134
            P L   ++P  W   E YY S  +Y++P    DY+SV+ +LKL  V++N+QPE+S    +
Sbjct  65   PILATTIIPEYWNEKETYYTSEAFYNKPGLAEDYVSVVDQLKLEDVIMNKQPEHSKFYNE  124

Query  135  ILEEFKNSKGSYTAKIFKLTTTLTIPYFGPTGPSWRLICLPEEHTEK----WKKFIFVSN  190
            IL ++++    Y   +  + +  T   + PT P +RL+ LP    +K    +K  ++++N
Sbjct  125  ILNQWEHDGFKYGDDLSVVVSQYTFSCWDPTKPHFRLVLLPSADDKKGARGFKDILYITN  184

Query  191  HCMSDGRSSIHFFHDLRDELNNIK-TPPKKLDYIFKYEEDYQLLRKLPEPIEKVIDFRPP  249
            H  SDG S  +   DL  EL     T  ++L+Y+  Y  DY+ L KLP+PIE+ + +   
Sbjct  185  HVTSDGTSGANLLEDLSIELGKFSGTNLQQLEYLLHYGRDYEQLPKLPDPIEEKVSYGVN  244

Query  250  YLFIPKSLLSGFIYNHLRFSSKGVCMRMDDVEKTDDVVTEIINISPTEFQAIKANIKSNI  309
              FI   LLS      L         R  D      +   II I PT  Q ++A +K  +
Sbjct  245  PSFIASFLLSQMGKKLLTKKWDQPITRPIDASPASHMA-HIIKIDPTGMQKMRARVKDKL  303

Query  310  QGKCTITPFLHVCWFVSLHKWGKFFKPLNFEWLTDIFIPADCRSQLPDDDEMRQMYRYGA  369
             GK T+TPF+  CWFVS ++ G F      E+  ++ +P + R  LP+D E+R  +RYG 
Sbjct  304  NGKATLTPFMQACWFVSCYEAGLFDDRKWNEFFINMAVPMNTRQYLPEDPEVRDRFRYGT  363

Query  370  NVGFIDFTPWISEFDMNDNKENFWPLIEHYHEVISEALRNKKHLHGLGFNIQGFVQKYVN  429
             VG  +F   IS F++  N++ FW L E+Y +  ++           G     FV K  N
Sbjct  364  VVGGTNFNFLISSFNITSNQQ-FWDLTEYYQQWFTKTREEGLATKTFGTLFADFVSKSNN  422

Query  430  IDKVMCDRAIGKRRGGTLLSNVGLFNQLEEPDAKYSICDLAFGQFQGSWHQAFSLGVCST  489
            +DK++    + +RR   LLSNVG   Q  +    + + DL F Q        FSL   ST
Sbjct  423  LDKLIKQDMMHQRRAFALLSNVGYRPQKAQESNPFQLQDLIFSQAACEMPFVFSLCCVST  482

Query  490  NVKGMNIVVASTKNVVGSQESLEELCSIYK  519
            ++ GM++ +   +  + SQ+   ++C +++
Sbjct  483  DIGGMSLTLTCCEESI-SQQQWHKICQVFE  511


> KLLA0F15202g KLLA0F15202g undefined product 9488586:9490139 forward 
MW:59470
Length=517

 Score =  282 bits (722),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 166/510 (33%), Positives = 263/510 (52%), Gaps = 9/510 (1%)

Query  16   CLK-EMIQNGHARRMGSVEDLYVALNRQNLYRNFCTYGELSDYCTRDQLTLALREICLKN  74
            CL  + ++ GHARR G VE++ +  +RQ LY NF  +GEL    +  QL  ALR + L+ 
Sbjct  5    CLSSKKLERGHARRAGYVEEVLLMEHRQKLYSNFVVHGELKSAASELQLAHALRALFLRY  64

Query  75   PTLLHIVLPTRWPNHENYYRSSEYYSRPHPVHDYISVLQELKLSGVVLNEQPEYSAVMKQ  134
            P L   ++P  W   E YY S  +Y++P    DY+SV+ +LKL  V++N+QPE+S    +
Sbjct  65   PILATTIIPEYWNEKETYYTSEAFYNKPGLAEDYVSVVDQLKLEDVIMNKQPEHSKFYNE  124

Query  135  ILEEFKNSKGSYTAKIFKLTTTLTIPYFGPTGPSWRLICLPEEHTEK----WKKFIFVSN  190
            IL ++++    Y   +  + +  T   + PT P +RL+ LP    +K    +K  ++++N
Sbjct  125  ILNQWEHDGFKYGDDLSVVVSQYTFSCWDPTKPHFRLVLLPSADDKKGARGFKDILYITN  184

Query  191  HCMSDGRSSIHFFHDLRDELNNIK-TPPKKLDYIFKYEEDYQLLRKLPEPIEKVIDFRPP  249
            H  SDG S  +   DL  EL     T  ++L+Y+  Y  DY+ L KLP+PIE+ + +   
Sbjct  185  HVTSDGTSGANLLEDLSIELGKFSGTNLQQLEYLLHYGRDYEQLPKLPDPIEEKVSYGVN  244

Query  250  YLFIPKSLLSGFIYNHLRFSSKGVCMRMDDVEKTDDVVTEIINISPTEFQAIKANIKSNI  309
              FI   LLS      L         R  D      +   II I PT  Q ++A +K  +
Sbjct  245  PSFIASFLLSQMGKKLLTKKWDQPITRPIDASPASHMA-HIIKIDPTGMQKMRARVKDKL  303

Query  310  QGKCTITPFLHVCWFVSLHKWGKFFKPLNFEWLTDIFIPADCRSQLPDDDEMRQMYRYGA  369
             GK T+TPF+  CWFVS ++ G F      E+  ++ +P + R  LP+D E+R  +RYG 
Sbjct  304  NGKATLTPFMQACWFVSCYEAGLFDDRKWNEFFINMAVPMNTRQYLPEDPEVRDRFRYGT  363

Query  370  NVGFIDFTPWISEFDMNDNKENFWPLIEHYHEVISEALRNKKHLHGLGFNIQGFVQKYVN  429
             VG  +F   IS F++  N++ FW L E+Y +  ++           G     FV K  N
Sbjct  364  VVGGTNFNFLISSFNITSNQQ-FWDLTEYYQQWFTKTREEGLATKTFGTLFADFVSKSNN  422

Query  430  IDKVMCDRAIGKRRGGTLLSNVGLFNQLEEPDAKYSICDLAFGQFQGSWHQAFSLGVCST  489
            +DK++    + +RR   LLSNVG   Q  +    + + DL F Q        FSL   ST
Sbjct  423  LDKLIKQDMMHQRRAFALLSNVGYRPQKAQESNPFQLQDLIFSQAACEMPFVFSLCCVST  482

Query  490  NVKGMNIVVASTKNVVGSQESLEELCSIYK  519
            ++ GM++ +   +  + SQ+   ++C +++
Sbjct  483  DIGGMSLTLTCCEESI-SQQQWHKICQVFE  511


> KLDOg4322
Length=517

 Score =  279 bits (713),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 158/505 (32%), Positives = 261/505 (52%), Gaps = 10/505 (1%)

Query  21   IQNGHARRMGSVEDLYVALNRQNLYRNFCTYGELSDYCTRDQLTLALREICLKNPTLLHI  80
            ++ GHARR G +E++ +  +RQ +Y NF  YG+L    +  +L+ AL  + ++ P L   
Sbjct  11   LERGHARRAGCIEEVLLMQHRQKIYSNFAVYGKLKTAASDLELSHALHGLFMRYPILAST  70

Query  81   VLPTRWPNHENYYRSSEYYSRPHPVHDYISVLQELKLSGVVLNEQPEYSAVMKQILEEFK  140
            ++P  W + E +Y+S E+YS+     DY+ VL +LK   +++N QPE++   ++IL ++ 
Sbjct  71   IMPDHWEDRETFYQSEEFYSQIGMAEDYMYVLDQLKFEDIIINHQPEHAEYFQRILNQWI  130

Query  141  NSKGSYTAKIFKLTTTLTIPYFGPTGPSWRLICLPEEHTEKWKK----FIFVSNHCMSDG  196
                 Y + +  +    T   + PT P +RL+ LP E  ++ +K     +FV+NH  +DG
Sbjct  131  KDGYEYGSGLPGVIDGYTFACWDPTKPQFRLLLLPSEDDKELEKGTKHILFVTNHIATDG  190

Query  197  RSSIHFFHDLRDELNNI-KTPPKKLDYIFKYEEDYQLLRKLPEPIEKVIDFRPPYLFIPK  255
             S  +   DL  EL  +     K LD +F YE+ Y  L KLP+ IE+ + ++    FI  
Sbjct  191  TSGANLLQDLSVELGKLFGKTLKPLDNVFCYEQQYDQLPKLPDRIEERVSYKVDLPFIGS  250

Query  256  SLLSGFIYNHL-RFSSKGVCMRMDDVEKTDDVVTEIINISPTEFQAIKANIKSNIQGKCT  314
             +L  F    L +   K +   +   + T    + +I I   E Q ++A +K  + GK T
Sbjct  251  FMLGQFGKKFLAKKWDKPITTHVGKSKTTH--TSHLIRIDVPEMQKMRARVKEKLHGKAT  308

Query  315  ITPFLHVCWFVSLHKWGKFFKPLNFEWLTDIFIPADCRSQLPDDDEMRQMYRYGANVGFI  374
            +TPFL  CWFVS ++ G F      E+L ++ +P + R  LP D+E+R  YRYG +V   
Sbjct  309  LTPFLQACWFVSCYEAGVFDNRRWNEYLVNMAVPMNSRQYLPQDEEIRDQYRYGTHVAGC  368

Query  375  DFTPWISEFDMNDNKENFWPLIEHYHEVISEALRNKKHLHGLGFNIQGFVQKYVNIDKVM  434
            ++   IS FD+  N++ FW L  +Y    ++       L   G     F+ K  N+DK++
Sbjct  369  NYNFLISSFDIKTNQQ-FWDLTAYYQNCFADIRDKNSSLKCFGLLFADFLMKSKNLDKLI  427

Query  435  CDRAIGKRRGGTLLSNVGLFNQLEEPDAKYSICDLAFGQFQGSWHQAFSLGVCSTNVKGM  494
             D    +RR   LLSNVG F Q  +    + + DL F Q        FSL   ST+V GM
Sbjct  428  SDDMTNQRRAFALLSNVGFFPQTSQESNPFQLQDLVFSQTSAEMPFVFSLNCVSTDVGGM  487

Query  495  NIVVASTKNVVGSQESLEELCSIYK  519
             I ++  +  +  Q+   ++C +++
Sbjct  488  TISMSCPEKSISHQQ-WRKVCEVFE  511


> KLAEg691 KLAEg691 undefined product 1518794:1520374 forward MW:43981
Length=389

 Score = 30.0 bits (66),  Expect = 4.4, Method: Compositional matrix adjust.
 Identities = 22/75 (30%), Positives = 34/75 (46%), Gaps = 6/75 (8%)

Query  367  YGANVGFIDFTPWISEFDMNDNKENFWPLIEHYHEVISEALRNKKHLHGLGFNIQGFVQK  426
            Y A+   I+ +P  S FD   ++ N+  LIE Y        + K  +  +G  + G VQ 
Sbjct  23   YQADANIIELSP--SNFDDVVHRTNYTTLIEFYAPWCGYCQQIKGTMKNVGRVLDGLVQ-  79

Query  427  YVNIDKVMCDRAIGK  441
               +  V CD +I K
Sbjct  80   ---VAAVNCDESINK  91


> sp|P32479|HIR1_YEAST Protein HIR1 OS=Saccharomyces cerevisiae 
(strain ATCC 204508 / S288c) GN=HIR1 PE=1 SV=2
Length=840

 Score = 29.6 bits (65),  Expect = 6.3, Method: Compositional matrix adjust.
 Identities = 12/38 (32%), Positives = 22/38 (58%), Gaps = 0/38 (0%)

Query  355  LPDDDEMRQMYRYGANVGFIDFTPWISEFDMNDNKENF  392
            +P +  M Q+YRYG +   +DF   I++  + D  ++F
Sbjct  394  IPLEKNMEQLYRYGVDKDSLDFPESINQLLLEDQTKSF  431


> KLDOg3269
Length=428

 Score = 29.3 bits (64),  Expect = 8.7, Method: Compositional matrix adjust.
 Identities = 14/30 (47%), Positives = 17/30 (57%), Gaps = 0/30 (0%)

Query  219  KLDYIFKYEEDYQLLRKLPEPIEKVIDFRP  248
            KLDY+ KY  D    R+LP P+E     RP
Sbjct  12   KLDYVVKYNHDSPNPRELPTPVEMKRVARP  41



Lambda     K      H
   0.322    0.138    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 4942681544


  Database: Kluyveromyces dobzhanskii proteins (Sep 2011)
    Posted date:  Sep 16, 2011  10:27 AM
  Number of letters in database: 2,453,336
  Number of sequences in database:  4,995

  Database: Kluyveromyces aestuari
i ATCC 18862 AEAS00000000_1 proteins
    Posted date:  Aug 30, 2011  10:04 AM
  Number of letters in database: 2,344,280
  Number of sequences in database:  4,706

  Database: Kluyveromyces wickerhamii UCD 54 210 AEAV00000000_1 proteins
    Posted date:  Aug 30, 2011  10:09 AM
  Number of letters in database: 2,378,134
  Number of sequences in database:  4,869

  Database: Kluyveromyces lactis
    Posted date:  Aug 15, 2011  4:07 PM
  Number of letters in database: 2,459,916
  Number of sequences in database:  5,076

  Database: Kluyveromyces lactis NRRL Y-1140
    Posted date:  Aug 15, 2011  4:01 PM
  Number of letters in database: 2,462,503
  Number of sequences in database:  5,085

  Database: Saccharomyces cerevisiae Swiss-Prot
    Posted date:  Jul 14, 2011  1:50 PM
  Number of letters in database: 3,026,183
  Number of sequences in database:  6,665



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Query
>query
MNEIDEKNQA PVQQECLKEM IQNGHARRMG SVEDLYVALN RQNLYRNFCT
      51  YGELSDYCTR DQLTLALREI CLKNPTLLHI VLPTRWPNHE NYYRSSEYYS
     101  RPHPVHDYIS VLQELKLSGV VLNEQPEYSA VMKQILEEFK NSKGSYTAKI
     151  FKLTTTLTIP YFGPTGPSWR LICLPEEHTE KWKKFIFVSN HCMSDGRSSI
     201  HFFHDLRDEL NNIKTPPKKL DYIFKYEEDY QLLRKLPEPI EKVIDFRPPY
     251  LFIPKSLLSG FIYNHLRFSS KGVCMRMDDV EKTDDVVTEI INISPTEFQA
     301  IKANIKSNIQ GKCTITPFLH VCWFVSLHKW GKFFKPLNFE WLTDIFIPAD
     351  CRSQLPDDDE MRQMYRYGAN VGFIDFTPWI SEFDMNDNKE NFWPLIEHYH
     401  EVISEALRNK KHLHGLGFNI QGFVQKYVNI DKVMCDRAIG KRRGGTLLSN
     451  VGLFNQLEEP DAKYSICDLA FGQFQGSWHQ AFSLGVCSTN VKGMNIVVAS
     501  TKNVVGSQES LEELCSIYKA LLLGP
Documentation
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API
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Adhoc 12.7 SciLifeLab tools Per Kraulis (per.kraulis@scilifelab.se)