blastn task: [no title]

Status
finished finished
Modified 2016-05-16T12:44:37Z
CPU time (s) 0.1
Size (bytes) 18768
Command blastn -num_descriptions 500 -outfmt 0 -dust no -db gsASS001Lm.aug.trna.KL.rRNA2.fna -num_alignments 250 -evalue 10.0 -task blastn
Error [none]
Output
BLASTN 2.2.25+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: Kluyveromyces dobzhanskii (Sep 2011)
           1 sequences; 10,741,898 total letters



Query= query

Length=810
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  gsASS001Lm                                                           471    7e-133


> gsASS001Lm
Length=10741898

 Score =  471 bits (522),  Expect = 7e-133
 Identities = 598/825 (73%), Gaps = 42/825 (5%)
 Strand=Plus/Plus

Query  1        GGTCAAACGTCATATTGATGGTATTGTACCTTTAGAATTACATATGACATTAAAGGTCGC  60
                ||| ||||||||||||||||| ||  ||||  | || || ||     | || ||  | ||
Sbjct  1654455  GGTGAAACGTCATATTGATGGGATAATACCACTTGACTTGCACCCAGCGTTGAAAATAGC  1654514

Query  61       ATTGTCCTTATGCTCATATAGATTCACGAAGGGCCCTTGGAGAAACAGTTATATCAAGCT  120
                 ||||||||||  || |||||||| || |||||||||||||||||||| || |||||  |
Sbjct  1654515  GTTGTCCTTATATTCGTATAGATTTACCAAGGGCCCTTGGAGAAACAGCTACATCAAATT  1654574

Query  121      CGGTATTGACCCAAGAACCTCGAATGAGTACGCGAAATACCAGACCGAATATTTCAAAAT  180
                 ||| | |||||| | || ||||| || || ||  | |  || || || |||||||||||
Sbjct  1654575  AGGTGTAGACCCACGTACTTCGAAAGATTATGCTCAGTTTCAAACGGAGTATTTCAAAAT  1654634

Query  181      CGAGAGGAGATTACTAACAGATCCAAGAATTAAAAAGAATTTGCCAGCTCCTCCACCAAA  240
                 ||||| | | | || ||||| || ||||| || || ||  | || || || ||  ||||
Sbjct  1654635  TGAGAGAAAACTCCTTACAGACCCTAGAATCAAGAAAAACCTACCGGCACCGCCGTCAAA  1654694

Query  241      GGACTACCAATCCAGTGTGCCTGGAGAAATTGACCCCAGGTTCGAATTTGACGGTAAAAG  300
                |||||| |||||||||||||||||  |||| || || |  |||||||| ||||| ||| |
Sbjct  1654695  GGACTATCAATCCAGTGTGCCTGGGCAAATAGATCCAAACTTCGAATTCGACGGGAAACG  1654754

Query  301      TATTCCATGGTATCTAATGTTACAAATAGACTTACTTTTGAAAGAACCTAACATCAATGA  360
                 || ||||||||  | ||||||||||||||| |||| || || ||||| || ||   |||
Sbjct  1654755  CATCCCATGGTACTTGATGTTACAAATAGACCTACTATTCAAGGAACCCAATATTTTTGA  1654814

Query  361      AATATATTCTCAAGTGGAGTTTTTGCCCGAGGCCAACGAATTAACAGGATGGTTTAACGA  420
                |||||| || ||     |||||||||| || |  |||||| | ||||||||||| | |||
Sbjct  1654815  AATATACTCACAGACCCAGTTTTTGCCGGAAGTGAACGAACTCACAGGATGGTTCAGCGA  1654874

Query  421      GTTAGATTTAACGAAGATACGGAAAATTGTTAAGTACGAATTGGGTTGCATGGTCCAAGG  480
                | | ||| |||| ||||| || |||||||| ||||||||||| || |||||||| |||||
Sbjct  1654875  GCTGGATCTAACTAAGATCCGTAAAATTGTCAAGTACGAATTAGGATGCATGGTGCAAGG  1654934

Query  481      AAACTATGAATTCAACGAGCATAAATTGACATTTTTCAAAAGGATGATCTACGTCAAAGA  540
                |||||| || || ||||| |||||  | || || ||||| || ||||| || || |||||
Sbjct  1654935  AAACTACGAGTTTAACGAACATAAGCTTACCTTCTTCAAGAGAATGATATATGTGAAAGA  1654994

Query  541      ATCAATGATGAAAGACCAAGATGCGGATGGGGACGTGGATATGGACCAAGATAACGACGA  600
                ||| ||||| || ||  ||||||| || || |||||||| ||||| |||||| |||| ||
Sbjct  1654995  ATCTATGATAAAGGAGAAAGATGCCGAGGGTGACGTGGACATGGATCAAGATGACGATGA  1655054

Query  601      T---------------AATGGTGTGGAGGATGGAGAGATGGATGACGCCTTATTGGAAGA  645
                |               ||||| ||  | || ||||| || ||||| |  |||||||||||
Sbjct  1655055  TGACGATATCGATGACAATGGAGTTCAAGAAGGAGAAATAGATGATGAATTATTGGAAGA  1655114

Query  646      GGCAGAAGATGAAGAGCAAGAAGACGCAGAAGATCAGGCCGGCGAGTCGGCATTGAAATC  705
                |||          ||||||||||| ||  ||||       |||||     || ||  |||
Sbjct  1655115  GGC---------GGAGCAAGAAGAAGCCAAAGA-------GGCGA-----CACTGCGATC  1655153

Query  706      GGAAATATCTGATGGTAAGCAAGATGAAAATTCAGAACCTGATACTTTTGACATAAAAAC  765
                ||||      | | | ||| ||||| |  |  | || || || |  || ||||| |||||
Sbjct  1655154  GGAA----GCGCTAG-AAG-AAGATCAGGACACTGAGCCGGACAACTTCGACATTAAAAC  1655207

Query  766      TGCTTCGTTCAACGAAGTTATGGATAAGATAGCCAAGCATAACTC  810
                ||| || ||| | ||||| || || ||||| ||||||||  ||||
Sbjct  1655208  TGCATCTTTCCAGGAAGTCATAGAAAAGATTGCCAAGCACGACTC  1655252


 Score = 42.8 bits (46),  Expect = 0.001
 Identities = 33/39 (85%), Gaps = 3/39 (7%)
 Strand=Plus/Plus

Query  640      GGAAGAGGCAGAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                ||||||||   |||| |||||||||||||||| | ||||
Sbjct  1613696  GGAAGAGG---AAGAGGAAGAGCAAGAAGACGAACAAGA  1613731


 Score = 37.4 bits (40),  Expect = 0.048
 Identities = 25/28 (90%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  650      GAAGATGAAGAGCAAGAAGACGCAGAAG  677
                |||||||||||||||||||| | || ||
Sbjct  5145471  GAAGATGAAGAGCAAGAAGAGGAAGCAG  5145498


 Score = 37.4 bits (40),  Expect = 0.048
 Identities = 23/25 (92%), Gaps = 0/25 (0%)
 Strand=Plus/Plus

Query  629      GACGCCTTATTGGAAGAGGCAGAAG  653
                || |||| |||||||||||||||||
Sbjct  5160045  GATGCCTGATTGGAAGAGGCAGAAG  5160069


 Score = 37.4 bits (40),  Expect = 0.048
 Identities = 22/23 (96%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  682      GGCCGGCGAGTCGGCATTGAAAT  704
                |||||||| ||||||||||||||
Sbjct  6741738  GGCCGGCGTGTCGGCATTGAAAT  6741716


 Score = 35.6 bits (38),  Expect = 0.17
 Identities = 27/32 (85%), Gaps = 0/32 (0%)
 Strand=Plus/Minus

Query  640      GGAAGAGGCAGAAGATGAAGAGCAAGAAGACG  671
                |||||||| ||||||||||||  | || ||||
Sbjct  7025932  GGAAGAGGGAGAAGATGAAGATGACGACGACG  7025901


 Score = 35.6 bits (38),  Expect = 0.17
 Identities = 25/29 (87%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  650      GAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                |||||||||||  ||||||| | ||||||
Sbjct  7360714  GAAGATGAAGAAGAAGAAGAAGAAGAAGA  7360686


 Score = 35.6 bits (38),  Expect = 0.17
 Identities = 25/29 (87%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  651       AAGATGAAGAGCAAGAAGACGCAGAAGAT  679
                 ||||||||||||| || |||| ||| |||
Sbjct  10359458  AAGATGAAGAGCACGACGACGAAGATGAT  10359430


 Score = 33.7 bits (36),  Expect = 0.58
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  535      CAAAGAATCAATGATGAA  552
                ||||||||||||||||||
Sbjct  1904542  CAAAGAATCAATGATGAA  1904559


 Score = 33.7 bits (36),  Expect = 0.58
 Identities = 26/31 (84%), Gaps = 0/31 (0%)
 Strand=Plus/Plus

Query  649      AGAAGATGAAGAGCAAGAAGACGCAGAAGAT  679
                |||||||||||||   ||||| || ||||||
Sbjct  2929088  AGAAGATGAAGAGGCTGAAGAGGCTGAAGAT  2929118


 Score = 33.7 bits (36),  Expect = 0.58
 Identities = 24/28 (86%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  650      GAAGATGAAGAGCAAGAAGACGCAGAAG  677
                |||||||||||  | ||||||| |||||
Sbjct  4328447  GAAGATGAAGACGACGAAGACGAAGAAG  4328474


 Score = 33.7 bits (36),  Expect = 0.58
 Identities = 24/28 (86%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  642      AAGAGGCAGAAGATGAAGAGCAAGAAGA  669
                |||| | ||||||||||||  |||||||
Sbjct  5159379  AAGAAGAAGAAGATGAAGAAGAAGAAGA  5159406


 Score = 33.7 bits (36),  Expect = 0.58
 Identities = 23/26 (89%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  650      GAAGATGAAGAGCAAGAAGACGCAGA  675
                |||||||||||  ||||||||| |||
Sbjct  6447265  GAAGATGAAGACGAAGAAGACGAAGA  6447290


 Score = 33.7 bits (36),  Expect = 0.58
 Identities = 27/32 (85%), Gaps = 3/32 (9%)
 Strand=Plus/Plus

Query  638      TTGGAAGAGGCAGAAGATGAAGAGCAAGAAGA  669
                ||||||||   ||||||||||||  |||||||
Sbjct  6788400  TTGGAAGA---AGAAGATGAAGATGAAGAAGA  6788428


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 20/22 (91%), Gaps = 0/22 (0%)
 Strand=Plus/Minus

Query  86      ACGAAGGGCCCTTGGAGAAACA  107
               |||| | |||||||||||||||
Sbjct  640454  ACGAGGTGCCCTTGGAGAAACA  640433


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 23/27 (86%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  640     GGAAGAGGCAGAAGATGAAGAGCAAGA  666
               |||||| | ||||||||||||  ||||
Sbjct  930353  GGAAGATGAAGAAGATGAAGAAAAAGA  930327


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 20/22 (91%), Gaps = 0/22 (0%)
 Strand=Plus/Plus

Query  697      ATTGAAATCGGAAATATCTGAT  718
                |||||| | |||||||||||||
Sbjct  1600701  ATTGAAGTGGGAAATATCTGAT  1600722


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 25/30 (84%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  649      AGAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                ||||||||||||  ||||||| |  |||||
Sbjct  1607482  AGAAGATGAAGATGAAGAAGAAGAGGAAGA  1607511


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 30/38 (79%), Gaps = 3/38 (7%)
 Strand=Plus/Plus

Query  641      GAAGAGGCAGAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                || |||| |||||||||||   | ||||||| ||| ||
Sbjct  1613034  GACGAGGAAGAAGATGAAG---ATGAAGACGAAGACGA  1613068


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 29/37 (79%), Gaps = 0/37 (0%)
 Strand=Plus/Minus

Query  561      ATGCGGATGGGGACGTGGATATGGACCAAGATAACGA  597
                |||||| |  |  |||||||||||| ||| | |||||
Sbjct  1664993  ATGCGGCTATGAGCGTGGATATGGAGCAACAAAACGA  1664957


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  649      AGAAGATGAAGAGCAAGAAG  668
                |||||| |||||||||||||
Sbjct  4310920  AGAAGAAGAAGAGCAAGAAG  4310939


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 23/27 (86%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  652      AGATGAAGAGCAAGAAGACGCAGAAGA  678
                ||| |||||||||||||| | ||| ||
Sbjct  4818073  AGAAGAAGAGCAAGAAGAAGAAGACGA  4818099


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 29/36 (81%), Gaps = 3/36 (8%)
 Strand=Plus/Plus

Query  643      AGAGGCAGAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                ||| | |||||||||||   |||| |||| ||||||
Sbjct  4992289  AGACGAAGAAGATGAAG---AAGATGACGAAGAAGA  4992321


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 22/25 (88%), Gaps = 0/25 (0%)
 Strand=Plus/Plus

Query  528      TCTACGTCAAAGAATCAATGATGAA  552
                ||||||||||| ||| ||||| |||
Sbjct  5167324  TCTACGTCAAACAATTAATGAGGAA  5167348


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 23/27 (86%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  745      TGATACTTTTGACATAAAAACTGCTTC  771
                ||| || |||||| | |||||||||||
Sbjct  7285254  TGACACCTTTGACTTCAAAACTGCTTC  7285228


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 25/30 (84%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  649      AGAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                |||||||||||   ||||||| || |||||
Sbjct  8648105  AGAAGATGAAGGAGAAGAAGAAGCTGAAGA  8648134


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  413      TTTAACGAGTTAGATTTAAC  432
                ||||| ||||||||||||||
Sbjct  8875085  TTTAAGGAGTTAGATTTAAC  8875066


 Score = 31.9 bits (34),  Expect = 2.0
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  543       CAATGATGAAAGACCAA  559
                 |||||||||||||||||
Sbjct  10383459  CAATGATGAAAGACCAA  10383443


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 30/39 (77%), Gaps = 0/39 (0%)
 Strand=Plus/Plus

Query  640      GGAAGAGGCAGAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                |||||| |  |||||||||||  |||| || |  |||||
Sbjct  1613039  GGAAGAAGATGAAGATGAAGACGAAGACGAGGAGGAAGA  1613077


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 19/21 (91%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  327      TAGACTTACTTTTGAAAGAAC  347
                |||| | ||||||||||||||
Sbjct  1824866  TAGATTGACTTTTGAAAGAAC  1824846


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  535      CAAAGAATCAATGATGAAA  553
                ||||| |||||||||||||
Sbjct  2978155  CAAAGTATCAATGATGAAA  2978137


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Minus

Query  775      CAACGAAGTTATGGAT  790
                ||||||||||||||||
Sbjct  3782905  CAACGAAGTTATGGAT  3782890


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 24/29 (83%), Gaps = 0/29 (0%)
 Strand=Plus/Plus

Query  650      GAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                |||||||||||  |||| |||| ||| ||
Sbjct  4328441  GAAGATGAAGATGAAGACGACGAAGACGA  4328469


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  207      GAATTAAAAAGAATTTGCC  225
                ||||||| |||||||||||
Sbjct  4352859  GAATTAAGAAGAATTTGCC  4352841


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 22/26 (85%), Gaps = 0/26 (0%)
 Strand=Plus/Minus

Query  641      GAAGAGGCAGAAGATGAAGAGCAAGA  666
                ||||| |||||  | |||||||||||
Sbjct  4383605  GAAGAAGCAGAGCAAGAAGAGCAAGA  4383580


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 19/21 (91%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  649      AGAAGATGAAGAGCAAGAAGA  669
                |||||| | ||||||||||||
Sbjct  4383606  AGAAGAAGCAGAGCAAGAAGA  4383586


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 31/41 (76%), Gaps = 0/41 (0%)
 Strand=Plus/Minus

Query  638      TTGGAAGAGGCAGAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                || |||||||||||||     |  ||||| |||| ||||||
Sbjct  4932999  TTTGAAGAGGCAGAAGCCATTGCCCAAGATGACGAAGAAGA  4932959


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Minus

Query  746      GATACTTTTGACATAA  761
                ||||||||||||||||
Sbjct  5662653  GATACTTTTGACATAA  5662638


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 30/39 (77%), Gaps = 0/39 (0%)
 Strand=Plus/Minus

Query  641      GAAGAGGCAGAAGATGAAGAGCAAGAAGACGCAGAAGAT  679
                |||||| | |||||||||||  | || || | ||| |||
Sbjct  5720514  GAAGAGTCTGAAGATGAAGACTATGAGGAAGAAGATGAT  5720476


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 19/21 (91%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  307      ATGGTATCTAATGTTACAAAT  327
                ||||||  |||||||||||||
Sbjct  5779769  ATGGTACGTAATGTTACAAAT  5779749


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 24/29 (83%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  534      TCAAAGAATCAATGATGAAAGACCAAGAT  562
                ||||  | ||| || ||||||||||||||
Sbjct  6131806  TCAACAAGTCATTGTTGAAAGACCAAGAT  6131778


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 19/21 (91%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  649      AGAAGATGAAGAGCAAGAAGA  669
                |||||||||||| ||||| ||
Sbjct  6604426  AGAAGATGAAGAACAAGAGGA  6604406


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Minus

Query  289      TGACGGTAAAAGTATT  304
                ||||||||||||||||
Sbjct  6808789  TGACGGTAAAAGTATT  6808774


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  236      CCAAAGGACTACCAATCCA  254
                ||||| |||||||||||||
Sbjct  7119572  CCAAACGACTACCAATCCA  7119590


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 19/21 (91%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  52       AAAGGTCGCATTGTCCTTATG  72
                || ||||||||||| ||||||
Sbjct  7651316  AATGGTCGCATTGTTCTTATG  7651336


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  268      AATTGACCCCAGGTTCGAA  286
                ||||||||||||||| |||
Sbjct  8160426  AATTGACCCCAGGTTTGAA  8160408


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  614      GATGGAGAGATGGATGACG  632
                ||| |||||||||||||||
Sbjct  8648587  GATTGAGAGATGGATGACG  8648569


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 25/31 (81%), Gaps = 0/31 (0%)
 Strand=Plus/Minus

Query  648      CAGAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                |||||  |||||||||||| || |  |||||
Sbjct  9113342  CAGAACCTGAAGAGCAAGACGAGGACGAAGA  9113312


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 24/29 (83%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  650      GAAGATGAAGAGCAAGAAGACGCAGAAGA  678
                |||||||||||  | |||||||| | |||
Sbjct  9447359  GAAGATGAAGACTATGAAGACGCTGGAGA  9447331


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 19/21 (91%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  649       AGAAGATGAAGAGCAAGAAGA  669
                 ||| ||| |||||||||||||
Sbjct  10415662  AGATGATCAAGAGCAAGAAGA  10415642


 Score = 30.1 bits (32),  Expect = 7.1
 Identities = 19/21 (91%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  649       AGAAGATGAAGAGCAAGAAGA  669
                 ||||||||||||| | |||||
Sbjct  10415701  AGAAGATGAAGAGGATGAAGA  10415681



Lambda     K      H
   0.634    0.408    0.912 

Gapped
Lambda     K      H
   0.625    0.410    0.780 

Effective search space used: 8421627648


  Database: Kluyveromyces dobzhanskii (Sep 2011)
    Posted date:  Sep 16, 2011  10:25 AM
  Number of letters in database: 10,741,898
  Number of sequences in database:  1



Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2
Query
>query
GGTCAAACGTCATATTGATGGTATTGTACCTTTAGAATTACATATGACATTAAAGGTCGCATTGTCCTTATGCTCATATAGATTCACGAAGGGCCCTTGGAGAAACAGTTATATCAAGCTCGGTATTGACCCAAGAACCTCGAATGAGTACGCGAAATACCAGACCGAATATTTCAAAATCGAGAGGAGATTACTAACAGATCCAAGAATTAAAAAGAATTTGCCAGCTCCTCCACCAAAGGACTACCAATCCAGTGTGCCTGGAGAAATTGACCCCAGGTTCGAATTTGACGGTAAAAGTATTCCATGGTATCTAATGTTACAAATAGACTTACTTTTGAAAGAACCTAACATCAATGAAATATATTCTCAAGTGGAGTTTTTGCCCGAGGCCAACGAATTAACAGGATGGTTTAACGAGTTAGATTTAACGAAGATACGGAAAATTGTTAAGTACGAATTGGGTTGCATGGTCCAAGGAAACTATGAATTCAACGAGCATAAATTGACATTTTTCAAAAGGATGATCTACGTCAAAGAATCAATGATGAAAGACCAAGATGCGGATGGGGACGTGGATATGGACCAAGATAACGACGATAATGGTGTGGAGGATGGAGAGATGGATGACGCCTTATTGGAAGAGGCAGAAGATGAAGAGCAAGAAGACGCAGAAGATCAGGCCGGCGAGTCGGCATTGAAATCGGAAATATCTGATGGTAAGCAAGATGAAAATTCAGAACCTGATACTTTTGACATAAAAACTGCTTCGTTCAACGAAGTTATGGATAAGATAGCCAAGCATAACTC
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Adhoc 12.7 SciLifeLab tools Per Kraulis (per.kraulis@scilifelab.se)