blastn task: [no title]

Status
finished finished
Modified 2013-11-06T13:51:47Z
CPU time (s) 0.1
Size (bytes) 19836
Command blastn -num_descriptions 500 -outfmt 0 -dust no -db gsASS001Lm.aug.trna.KL.rRNA2.fna -num_alignments 250 -evalue 10.0 -task blastn
Error [none]
Output
BLASTN 2.2.25+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: Kluyveromyces dobzhanskii (Sep 2011)
           1 sequences; 10,741,898 total letters



Query= query

Length=2106
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  gsASS001Lm                                                          3793    0.0  


> gsASS001Lm
Length=10741898

 Score = 3793 bits (4206),  Expect = 0.0
 Identities = 2105/2106 (99%), Gaps = 0/2106 (0%)
 Strand=Plus/Minus

Query  1         TTTATTGAATGGCTGCAGTCGAAGAATGTCGACGTCACGAAGCCTGGTGCCGGAATGGTG  60
                 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568756  TTAATTGAATGGCTGCAGTCGAAGAATGTCGACGTCACGAAGCCTGGTGCCGGAATGGTG  10568697

Query  61        TGTTCCATATGCAATCACCCGATTGAGTTTAGGACCTTATACGACGAATCAATGCCCGAT  120
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568696  TGTTCCATATGCAATCACCCGATTGAGTTTAGGACCTTATACGACGAATCAATGCCCGAT  10568637

Query  121       AAAATCCCGTTTCTGCTGTTAGTGAAACACAGCACTTTAAAAATTTTCGAAACGTTCAAC  180
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568636  AAAATCCCGTTTCTGCTGTTAGTGAAACACAGCACTTTAAAAATTTTCGAAACGTTCAAC  10568577

Query  181       TACTATTTCAAATTCACTTTAATAGGATTCCTTTTCTTTGGTGGAATTCCATTGTCATGG  240
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568576  TACTATTTCAAATTCACTTTAATAGGATTCCTTTTCTTTGGTGGAATTCCATTGTCATGG  10568517

Query  241       AATATATGGGGAAAGCTTTATACCGCTACAGTGGACGATTTCTCTTTTCCTAACAATAGT  300
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568516  AATATATGGGGAAAGCTTTATACCGCTACAGTGGACGATTTCTCTTTTCCTAACAATAGT  10568457

Query  301       AAATGGCATCTCAATCTGATATATGGGTTTGAGAAGAATGTACCGCAGAGTCCAAAACCC  360
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568456  AAATGGCATCTCAATCTGATATATGGGTTTGAGAAGAATGTACCGCAGAGTCCAAAACCC  10568397

Query  361       CTGGATATTCTGTATCAGCTTGCTATTAATTATAGATTTTCACTTCTACAAATTTTGATG  420
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568396  CTGGATATTCTGTATCAGCTTGCTATTAATTATAGATTTTCACTTCTACAAATTTTGATG  10568337

Query  421       GTATTGGTAGTACATGCCATTGCGTATCTACAGTACGACATGGTAGTTCGCGAACCGATC  480
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568336  GTATTGGTAGTACATGCCATTGCGTATCTACAGTACGACATGGTAGTTCGCGAACCGATC  10568277

Query  481       TTCTATAAAATGATTTTGCATAAGATTGGACTAAAATTCACAAAGCAGGAACTGGCTATG  540
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568276  TTCTATAAAATGATTTTGCATAAGATTGGACTAAAATTCACAAAGCAGGAACTGGCTATG  10568217

Query  541       CAAACATTGAGACAAAGATTTCCTGATATGGATCCAAGTGATGTTGATGTTCTCGTAAAT  600
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568216  CAAACATTGAGACAAAGATTTCCTGATATGGATCCAAGTGATGTTGATGTTCTCGTAAAT  10568157

Query  601       GTTCTCAATAGACAACAACAAGACGAGTCCAATGATGACGATACCAGCGATGAAGACCTT  660
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568156  GTTCTCAATAGACAACAACAAGACGAGTCCAATGATGACGATACCAGCGATGAAGACCTT  10568097

Query  661       CCACAAAATAATATTAATGATGAAAACGATGGGCAACTCGAGGATATCGGTCAGTAGTTA  720
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568096  CCACAAAATAATATTAATGATGAAAACGATGGGCAACTCGAGGATATCGGTCAGTAGTTA  10568037

Query  721       TTGTTTACTATACAATGTTTAGATTTTGACACTCTACATTAGCTCCACCAGTATAGATTC  780
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10568036  TTGTTTACTATACAATGTTTAGATTTTGACACTCTACATTAGCTCCACCAGTATAGATTC  10567977

Query  781       AAGAAGTTTCTTAGTATATAAGGAATAGAGATTTGTTGTGTATGTATGTTGTCTTTGACA  840
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567976  AAGAAGTTTCTTAGTATATAAGGAATAGAGATTTGTTGTGTATGTATGTTGTCTTTGACA  10567917

Query  841       ATGCTTCTGCAGCCAAACTTTGTGGGGATCACAATGAGTTTTCCCACTTACAACTATTGA  900
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567916  ATGCTTCTGCAGCCAAACTTTGTGGGGATCACAATGAGTTTTCCCACTTACAACTATTGA  10567857

Query  901       TATTACCCGGCTTTGGGGTAAATTTGAAATCGGAATGAAATTTCAATAGCTGAATGAATA  960
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567856  TATTACCCGGCTTTGGGGTAAATTTGAAATCGGAATGAAATTTCAATAGCTGAATGAATA  10567797

Query  961       TATCAATACTCCCACCGATCATCAATACTGTACACTCATACAAGTTTATCATTAGCTTCT  1020
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567796  TATCAATACTCCCACCGATCATCAATACTGTACACTCATACAAGTTTATCATTAGCTTCT  10567737

Query  1021      AAGTACAGCAGAATATTTTGGATACATTTTCTGCCTCTGATAGCAGAGATCATCGCATTC  1080
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567736  AAGTACAGCAGAATATTTTGGATACATTTTCTGCCTCTGATAGCAGAGATCATCGCATTC  10567677

Query  1081      AGGATTTGTGTTTACCATTAACATCGCTGCGGTCAACAAATTTACAAAGCGTTTAGTCAC  1140
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567676  AGGATTTGTGTTTACCATTAACATCGCTGCGGTCAACAAATTTACAAAGCGTTTAGTCAC  10567617

Query  1141      ACAAGATATTATTCTTGCTCCTAGCATACTCTGCTACTGTTTCTGAACGAGTAGTTACTT  1200
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567616  ACAAGATATTATTCTTGCTCCTAGCATACTCTGCTACTGTTTCTGAACGAGTAGTTACTT  10567557

Query  1201      TACTGGTGTATTACTGACCGCTATCTAACATGGAGAGACATTTCGCACAAAGAAGGCTTG  1260
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567556  TACTGGTGTATTACTGACCGCTATCTAACATGGAGAGACATTTCGCACAAAGAAGGCTTG  10567497

Query  1261      ACGCTCAACTAGATGCGCAACTTGGACGACGTGACCATGTCGAAGAAGAAGGGGAAGAAG  1320
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567496  ACGCTCAACTAGATGCGCAACTTGGACGACGTGACCATGTCGAAGAAGAAGGGGAAGAAG  10567437

Query  1321      GTGGAATAAATCCTCAACCTGCAGTAATACTGGACAATCAAGATGGCCAACCGACAGCAA  1380
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567436  GTGGAATAAATCCTCAACCTGCAGTAATACTGGACAATCAAGATGGCCAACCGACAGCAA  10567377

Query  1381      TCTTGAATTTGAATCTTGACTACAAATATTTGCCGAGTTACATTTCAATTGTCTTTTCTG  1440
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567376  TCTTGAATTTGAATCTTGACTACAAATATTTGCCGAGTTACATTTCAATTGTCTTTTCTG  10567317

Query  1441      TGATCGGCGGATATCTGTTTGTTTCGTACGCTTTAGCGACGGTTATTGGTTATCTATTGA  1500
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567316  TGATCGGCGGATATCTGTTTGTTTCGTACGCTTTAGCGACGGTTATTGGTTATCTATTGA  10567257

Query  1501      ATTTCATCTATTTTAGACTAATTACTATCATGCTAAATGGGATCAAAATACTGGCAACAT  1560
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567256  ATTTCATCTATTTTAGACTAATTACTATCATGCTAAATGGGATCAAAATACTGGCAACAT  10567197

Query  1561      TTTTAAGAATCCCATACTATAACCAAAAAGTAACAAAAATGTGGTATGCGGCATTCGTGA  1620
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567196  TTTTAAGAATCCCATACTATAACCAAAAAGTAACAAAAATGTGGTATGCGGCATTCGTGA  10567137

Query  1621      TTGAAAATTGGATTTACCAGTCAATTCTTACACCGATTATATCAAACTATTATGATTATT  1680
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567136  TTGAAAATTGGATTTACCAGTCAATTCTTACACCGATTATATCAAACTATTATGATTATT  10567077

Query  1681      TGCATGGCACAGCTAAGCATACAATGTTAGTGAGAATGATTGCACCGGTCAGTACATACA  1740
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567076  TGCATGGCACAGCTAAGCATACAATGTTAGTGAGAATGATTGCACCGGTCAGTACATACA  10567017

Query  1741      CAACGTTTATTGTTCTTTGCTGCAGCATTCCAGAGATTTTATCCAGAGGACATTCTAAAA  1800
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10567016  CAACGTTTATTGTTCTTTGCTGCAGCATTCCAGAGATTTTATCCAGAGGACATTCTAAAA  10566957

Query  1801      AGTTTCCTCTGAAGAGTTCGATCAAGAGAACTATCTTCAAATTTTCCTACATTATAAAAT  1860
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10566956  AGTTTCCTCTGAAGAGTTCGATCAAGAGAACTATCTTCAAATTTTCCTACATTATAAAAT  10566897

Query  1861      GCACATTAAAGGTTCTAGGTTTGTTCACTCTTGAGCTGGCTGGATTCCCTATACTAGCCG  1920
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10566896  GCACATTAAAGGTTCTAGGTTTGTTCACTCTTGAGCTGGCTGGATTCCCTATACTAGCCG  10566837

Query  1921      GCTTCTTAATTGATGTATCACTAATATCACCAATGTTGCTACCTCAAAATCACCTAACTT  1980
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10566836  GCTTCTTAATTGATGTATCACTAATATCACCAATGTTGCTACCTCAAAATCACCTAACTT  10566777

Query  1981      TTGTACCGCATTTTTGTTCCTTCTGGCCACCCATGGCCTTCATCACTTATTGGGCTATCG  2040
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10566776  TTGTACCGCATTTTTGTTCCTTCTGGCCACCCATGGCCTTCATCACTTATTGGGCTATCG  10566717

Query  2041      GTACTGTTTATATGTATCATTTTGCACAATATGTTGGAATGGTCAGGCAGTATATTATAA  2100
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  10566716  GTACTGTTTATATGTATCATTTTGCACAATATGTTGGAATGGTCAGGCAGTATATTATAA  10566657

Query  2101      GACCGG  2106
                 ||||||
Sbjct  10566656  GACCGG  10566651


 Score = 35.6 bits (38),  Expect = 0.44
 Identities = 24/27 (89%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  1372     CGACAGCAATCTTGAATTTGAATCTTG  1398
                || ||||||||||||  ||||||||||
Sbjct  1537598  CGTCAGCAATCTTGACGTTGAATCTTG  1537572


 Score = 35.6 bits (38),  Expect = 0.44
 Identities = 24/27 (89%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  1372     CGACAGCAATCTTGAATTTGAATCTTG  1398
                || ||||||||||||  ||||||||||
Sbjct  1574249  CGTCAGCAATCTTGACGTTGAATCTTG  1574275


 Score = 35.6 bits (38),  Expect = 0.44
 Identities = 21/22 (96%), Gaps = 0/22 (0%)
 Strand=Plus/Minus

Query  1302     GAAGAAGAAGGGGAAGAAGGTG  1323
                ||||||||||| ||||||||||
Sbjct  5611002  GAAGAAGAAGGTGAAGAAGGTG  5610981


 Score = 33.7 bits (36),  Expect = 1.5
 Identities = 23/26 (89%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  1299     GTCGAAGAAGAAGGGGAAGAAGGTGG  1324
                ||| | ||||||| ||||||||||||
Sbjct  3901406  GTCAATGAAGAAGAGGAAGAAGGTGG  3901431


 Score = 33.7 bits (36),  Expect = 1.5
 Identities = 20/21 (96%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  141      AGTGAAACACAGCACTTTAAA  161
                |||||||||||||| ||||||
Sbjct  4484453  AGTGAAACACAGCAGTTTAAA  4484473


 Score = 33.7 bits (36),  Expect = 1.5
 Identities = 21/23 (92%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  1298     TGTCGAAGAAGAAGGGGAAGAAG  1320
                ||| ||||||||||| |||||||
Sbjct  4936214  TGTTGAAGAAGAAGGAGAAGAAG  4936192


 Score = 33.7 bits (36),  Expect = 1.5
 Identities = 21/23 (92%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  1298     TGTCGAAGAAGAAGGGGAAGAAG  1320
                || ||||||||||| ||||||||
Sbjct  5145428  TGGCGAAGAAGAAGAGGAAGAAG  5145450


 Score = 33.7 bits (36),  Expect = 1.5
 Identities = 23/26 (89%), Gaps = 0/26 (0%)
 Strand=Plus/Minus

Query  1298     TGTCGAAGAAGAAGGGGAAGAAGGTG  1323
                || ||||||||||| |||||||| ||
Sbjct  8774532  TGACGAAGAAGAAGAGGAAGAAGTTG  8774507


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  917     GGTAAATTTGAAATCGGAAT  936
               |||| |||||||||||||||
Sbjct  533757  GGTATATTTGAAATCGGAAT  533738


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1497     TTGAATTTCATCTATTT  1513
                |||||||||||||||||
Sbjct  1853527  TTGAATTTCATCTATTT  1853543


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 22/25 (88%), Gaps = 0/25 (0%)
 Strand=Plus/Plus

Query  1810     TGAAGAGTTCGATCAAGAGAACTAT  1834
                |||| | ||||||||||||||| ||
Sbjct  2511272  TGAATAATTCGATCAAGAGAACGAT  2511296


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  404      TTCTACAAATTTTGATGGTA  423
                |||||| |||||||||||||
Sbjct  3058767  TTCTACGAATTTTGATGGTA  3058786


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 23/27 (86%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  1301     CGAAGAAGAAGGGGAAGAAGGTGGAAT  1327
                |||||| || |  ||||||||||||||
Sbjct  3446067  CGAAGAGGATGATGAAGAAGGTGGAAT  3446093


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 21/22 (96%), Gaps = 1/22 (4%)
 Strand=Plus/Minus

Query  801      AGGAATAGAGATTTG-TTGTGT  821
                ||||||||||||||| ||||||
Sbjct  4118944  AGGAATAGAGATTTGTTTGTGT  4118923


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 23/27 (86%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  224      GAATTCCATTGTCATGGAATATATGGG  250
                || || ||| | |||||||||||||||
Sbjct  4186663  GATTTTCATCGCCATGGAATATATGGG  4186689


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 31/40 (78%), Gaps = 0/40 (0%)
 Strand=Plus/Minus

Query  163      ATTTTCGAAACGTTCAACTACTATTTCAAATTCACTTTAA  202
                ||||||||| | ||| ||||  || |   |||||||||||
Sbjct  4221018  ATTTTCGAACCATTCTACTAGCATATAGCATTCACTTTAA  4220979


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1423     TTTCAATTGTCTTTTCT  1439
                |||||||||||||||||
Sbjct  4466684  TTTCAATTGTCTTTTCT  4466700


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 20/22 (91%), Gaps = 0/22 (0%)
 Strand=Plus/Plus

Query  617      AACAAGACGAGTCCAATGATGA  638
                ||||||| || |||||||||||
Sbjct  4483187  AACAAGATGAATCCAATGATGA  4483208


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 23/27 (86%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  1647     CTTACACCGATTATATCAAACTATTAT  1673
                ||| ||||| || ||||||||||| ||
Sbjct  4560479  CTTCCACCGTTTCTATCAAACTATCAT  4560505


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 23/27 (86%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  1515     AGACTAATTACTATCATGCTAAATGGG  1541
                |||| ||| || ||| |||||||||||
Sbjct  5916015  AGACGAATGACAATCCTGCTAAATGGG  5916041


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  230      CATTGTCATGGAATATATGG  249
                |||||||||||||| |||||
Sbjct  5974475  CATTGTCATGGAATGTATGG  5974494


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 22/25 (88%), Gaps = 0/25 (0%)
 Strand=Plus/Plus

Query  317      TGATATATGGGTTTGAGAAGAATGT  341
                |||||||||||||  |||| |||||
Sbjct  6345316  TGATATATGGGTTGTAGAATAATGT  6345340


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 20/22 (91%), Gaps = 0/22 (0%)
 Strand=Plus/Plus

Query  675      TAATGATGAAAACGATGGGCAA  696
                |||||| ||||||||||| |||
Sbjct  6486912  TAATGACGAAAACGATGGACAA  6486933


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 22/25 (88%), Gaps = 0/25 (0%)
 Strand=Plus/Plus

Query  334      AAGAATGTACCGCAGAGTCCAAAAC  358
                |||||| |||||  |||||||||||
Sbjct  6995762  AAGAATCTACCGAGGAGTCCAAAAC  6995786


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 23/27 (86%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  367      ATTCTGTATCAGCTTGCTATTAATTAT  393
                ||||| | |||||||||||| | ||||
Sbjct  7362826  ATTCTTTTTCAGCTTGCTATCAGTTAT  7362800


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  929      ATCGGAATGAAATTTCA  945
                |||||||||||||||||
Sbjct  8525999  ATCGGAATGAAATTTCA  8526015


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 20/22 (91%), Gaps = 0/22 (0%)
 Strand=Plus/Minus

Query  2061     TTTGCACAATATGTTGGAATGG  2082
                |||| |||||||||||| ||||
Sbjct  9238329  TTTGGACAATATGTTGGCATGG  9238308


 Score = 31.9 bits (34),  Expect = 5.4
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1302     GAAGAAGAAGGGGAAGA  1318
                |||||||||||||||||
Sbjct  9342690  GAAGAAGAAGGGGAAGA  9342706



Lambda     K      H
   0.634    0.408    0.912 

Gapped
Lambda     K      H
   0.625    0.410    0.780 

Effective search space used: 22332349809


  Database: Kluyveromyces dobzhanskii (Sep 2011)
    Posted date:  Sep 16, 2011  10:25 AM
  Number of letters in database: 10,741,898
  Number of sequences in database:  1



Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2
Query
>query
TTTATTGAATGGCTGCAGTCGAAGAATGTCGACGTCACGAAGCCTGGTGC
CGGAATGGTGTGTTCCATATGCAATCACCCGATTGAGTTTAGGACCTTAT
ACGACGAATCAATGCCCGATAAAATCCCGTTTCTGCTGTTAGTGAAACAC
AGCACTTTAAAAATTTTCGAAACGTTCAACTACTATTTCAAATTCACTTT
AATAGGATTCCTTTTCTTTGGTGGAATTCCATTGTCATGGAATATATGGG
GAAAGCTTTATACCGCTACAGTGGACGATTTCTCTTTTCCTAACAATAGT
AAATGGCATCTCAATCTGATATATGGGTTTGAGAAGAATGTACCGCAGAG
TCCAAAACCCCTGGATATTCTGTATCAGCTTGCTATTAATTATAGATTTT
CACTTCTACAAATTTTGATGGTATTGGTAGTACATGCCATTGCGTATCTA
CAGTACGACATGGTAGTTCGCGAACCGATCTTCTATAAAATGATTTTGCA
TAAGATTGGACTAAAATTCACAAAGCAGGAACTGGCTATGCAAACATTGA
GACAAAGATTTCCTGATATGGATCCAAGTGATGTTGATGTTCTCGTAAAT
GTTCTCAATAGACAACAACAAGACGAGTCCAATGATGACGATACCAGCGA
TGAAGACCTTCCACAAAATAATATTAATGATGAAAACGATGGGCAACTCG
AGGATATCGGTCAGTAGTTATTGTTTACTATACAATGTTTAGATTTTGAC
ACTCTACATTAGCTCCACCAGTATAGATTCAAGAAGTTTCTTAGTATATA
AGGAATAGAGATTTGTTGTGTATGTATGTTGTCTTTGACAATGCTTCTGC
AGCCAAACTTTGTGGGGATCACAATGAGTTTTCCCACTTACAACTATTGA
TATTACCCGGCTTTGGGGTAAATTTGAAATCGGAATGAAATTTCAATAGC
TGAATGAATATATCAATACTCCCACCGATCATCAATACTGTACACTCATA
CAAGTTTATCATTAGCTTCTAAGTACAGCAGAATATTTTGGATACATTTT
CTGCCTCTGATAGCAGAGATCATCGCATTCAGGATTTGTGTTTACCATTA
ACATCGCTGCGGTCAACAAATTTACAAAGCGTTTAGTCACACAAGATATT
ATTCTTGCTCCTAGCATACTCTGCTACTGTTTCTGAACGAGTAGTTACTT
TACTGGTGTATTACTGACCGCTATCTAACATGGAGAGACATTTCGCACAA
AGAAGGCTTGACGCTCAACTAGATGCGCAACTTGGACGACGTGACCATGT
CGAAGAAGAAGGGGAAGAAGGTGGAATAAATCCTCAACCTGCAGTAATAC
TGGACAATCAAGATGGCCAACCGACAGCAATCTTGAATTTGAATCTTGAC
TACAAATATTTGCCGAGTTACATTTCAATTGTCTTTTCTGTGATCGGCGG
ATATCTGTTTGTTTCGTACGCTTTAGCGACGGTTATTGGTTATCTATTGA
ATTTCATCTATTTTAGACTAATTACTATCATGCTAAATGGGATCAAAATA
CTGGCAACATTTTTAAGAATCCCATACTATAACCAAAAAGTAACAAAAAT
GTGGTATGCGGCATTCGTGATTGAAAATTGGATTTACCAGTCAATTCTTA
CACCGATTATATCAAACTATTATGATTATTTGCATGGCACAGCTAAGCAT
ACAATGTTAGTGAGAATGATTGCACCGGTCAGTACATACACAACGTTTAT
TGTTCTTTGCTGCAGCATTCCAGAGATTTTATCCAGAGGACATTCTAAAA
AGTTTCCTCTGAAGAGTTCGATCAAGAGAACTATCTTCAAATTTTCCTAC
ATTATAAAATGCACATTAAAGGTTCTAGGTTTGTTCACTCTTGAGCTGGC
TGGATTCCCTATACTAGCCGGCTTCTTAATTGATGTATCACTAATATCAC
CAATGTTGCTACCTCAAAATCACCTAACTTTTGTACCGCATTTTTGTTCC
TTCTGGCCACCCATGGCCTTCATCACTTATTGGGCTATCGGTACTGTTTA
TATGTATCATTTTGCACAATATGTTGGAATGGTCAGGCAGTATATTATAA
GACCGG
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Adhoc 12.7 SciLifeLab tools Per Kraulis (per.kraulis@scilifelab.se)